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CANCER MISCELLANEOUS


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Pyromaker logo

Pyromaker is a web-based application that produces simulated pyrograms based on user input including the percentage of tumor and normal cells, the wild-type sequence, the dispensation order, and any number of mutant sequences. Pyromaker calculates the relative mutant and wild-type allele percentages and then uses these to generate the expected signal at each point in the dispensation sequence. The final result is a virtual trace of the expected pyrogram

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NCCN logo

National comprehensive cancer network to find resources in the fight against cancer.

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Cancer Images (NCI) logo

The images are sorted by species and organ

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Progenetix Genomic Profiling in Cancer logo

The Progenetix database provides an overview of copy number abnormalities in human cancer from Comparative Genomic Hybridization (CGH) experiments. As a curated database, it collects genomic gain/loss information of individual cancer and leukemia cases, published in peer reviewed journals.

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Cancer Genome Characterization Initiative logo

The NCI Cancer Genome Characterization Initiative (CGCI) incorporates multiple genomic characterization methods including exome and transcriptome analysis using second generation sequencing.

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International Cancer Genome Consortium logo

The ICGC Goal is to obtain a comprehensive description of genomic, transcriptomic and epigenomic changes in 50 different tumor types and/or subtypes which are of clinical and societal importance across the globe. ICGC has been organized as an international effort to harmonize the large number of projects that are now, or shortly will be, underway that have the common aim of elucidating comprehensively the genomic changes present in many forms of cancer.

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UCSC Cancer Genomics Browser logo

The UCSC Cancer Genomics Browser comprises a suite of web-based tools to integrate, visualize and analyze cancer genomics and clinical data. This browser displays a whole-genome and pathway-oriented view of genome-wide experimental measurements for individual and sets of samples alongside their associated clinical information.

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CCDB Cervical Cancer Genes logo

The Cervical Cancer Gene Database is a manually curated catalog of experimenatlly validated genes that are thought to be involved in the different stages of cervical carcinogenesis

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Dictionary of Cancer Terms logo

It is possible to toggle between definitions in English and Spanish

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Chromosome Aberrations in Cancer logo

The information in the Mitelman Database of Chromosome Aberrations and Gene Fusions in Cancer relates chromosomal aberrations to tumor characteristics, based either on individual cases or associations

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Cancer Genome Anatomy Project (CGAP) logo

The NCI's Cancer Genome Anatomy Project sought to determine the gene expression profiles of normal, precancer, and cancer cells, leading eventually to improved detection, diagnosis, and treatment for the patient.

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Breast Cancer Tissue Bank logo

The Breast Cancer Campaign Tissue Bank is an initiative where tissue samples donated by patients from across the UK will be safely and consistently stored. These samples will then be available to scientists to study how and why breast cancer develops and spreads, and to devise the best possible treatments. There is currently no other large source of breast tissue available to scientists and doctors, like this one, anywhere in the world.

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Genomics of Drug Sensitivity in Cancer logo

The Genomics of Drug Sensitivity in Cancer project from Weelcome Trust is an academic research program to identify molecular features of cancers that predict response to anti-cancer drugs. Participants are performing a large-scale drug screen incorporating detailed genomic and gene expression analyses to systematically identify drug response biomarkers.

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Cancer Gene Census logo

The Cancer Gene Census is an ongoing effort to catalogue those genes for which mutations have been causally implicated in cancer.

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NCI logo

General information on various cancer topics

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Pancreatic Expression DB logo

The Pancreatic Expression database is a major component of the EU project MolDiag-Paca, whose mission is to bring together leading groups in European pancreatic cancer research from academia and industry to develop novel molecular diagnostic tools for the prevention and diagnosis of pancreatic cancer.

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Cancer Immunome DB logo

The Academy of Cancer Immunology, with support from the Ludwig Institute for Cancer Research (LICR), has taken up the task to setup a database that will present through a single point of access information about all of the gene products against which an immune response has been documented in cancer patients.

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OASIS logo

OASIS is an open-access web portal that enables cancer researchers to perform exploratory and integrative analyses of somatic mutation, copy number changes (CNV) and gene expression data from thousands of tumor, normal tissues and cell lines representing a broad spectrum of malignancies. OASIS provides a powerful resource to the cancer research community by combining one of the largest repositories of multi-omics datasets on the web with intuitive analytics (Fernandez-Banet et al., Nature Meth 1

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