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GENE INFORMATION SEARCH


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Wikigenes logo

Wikigenes is the first wiki system to combine the collaborative and largely altruistic possibilities of wikis with explicit authorship. In view of the extraordinary success of Wikipedia there remains no doubt about the potential of collaborative publishing, yet its adoption in science has been limited." So writes Robert Hofmann of MIT in a Perspective article in the September edition of Nature Genetics (40, 1047-1051; 2008) about this "dynamic collaborative knowledge base for the life sciences t

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Ensembl logo
browsing genes and genomes

Ensembl, a genome browser project, produces genome databases for vertebrates, and makes this information freely available online.

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NCBI Gene logo
Subcategories: ncbi

Gene (NCBI) is a searchable database of genes, from RefSeq genomes, and defined by sequence and/or located in the NCBI Map Viewer

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Map Viewer logo
Subcategories: ncbi

The Map Viewer, NCBI genome browser, allows you to view and search an organism's complete genome, display chromosome maps, and zoom into progressively greater levels of detail, down to the sequence data for a region of interest.

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OMIM logo
Online Mendelian Inheritance in Man
Subcategories: ncbi

OMIM (Online Mendelian Inheritance in Man) is a compendium of human genes and genetic phenotypes. The full-text, referenced overviews in OMIM contain information on all known mendelian disorders and over 12,000 genes. OMIM focuses on the relationship between phenotype and genotype.

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ENCODE logo
Encyclopedia of DNA Elements

A major goal of the Encyclopedia of DNA Elements (ENCODE) is to annotate all functional elements of the human genome including protein-coding genes, pseudogenes, and non-coding transcribed loci and to catalog the products of transcription including splice isoforms and regulatory elements that control the cells and circumstances in which a gene is active.

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HGNC Gene names logo
unique gene symbols and names

The HUGO Gene Nomenclature Committee (HGNC) has assigned unique gene symbols and names to over 33,000 human loci, of which around 19,000 are protein coding. http://genenames.org is a curated online repository of HGNC-approved gene nomenclature and associated resources including links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages.

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WashU Human Epigenome Browser logo
WashU Human Epigenome Browser allows: Epigenome

The browser currently hosts Human Epigenome Atlas data produced by the Roadmap Epigenomics project,but lets users diverge from the strict genome-centric view of the UCSC browser to, for instance, view all genes (or promoters, or 3’ UTRs) in a given pathway side by side. “You can do lots of Google Maps-style operations, and you can look at your data in the context of their metadata.

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GeneCards logo

GeneCards maintained by Weizmann Institute of Science is a searchable, integrated, database of human genes that provides concise genomic, transcriptomic, genetic, proteomic, functional and disease related information on all known and predicted human genes.

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UCSC Genome Browser logo

The UCSC Genome Browser is an on-line genome browser hosted by the University of California, Santa Cruz (UCSC).[2] [3] It is an interactive website offering access to genome sequence data from a variety of vertebrate and invertebrate species and major model organisms, integrated with a large collection of aligned annotations.

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Unigene logo
Subcategories: ncbi

UniGene (NCBI) is an organized view of the transcriptome. Each UniGene entry is a set of transcript sequences that appear to come from the same transcription locus (gene or expressed pseudogene), together with information on protein similarities, gene expression, cDNA clone reagents, and genomic location.

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Nucleotide logo
Subcategories: ncbi

The Nucleotide database (NCBI) is a collection of sequences from several sources, including GenBank, RefSeq, TPA and PDB. Genome, gene and transcript sequence data provide the foundation for biomedical research and discovery.

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GTExPortal logo

Description not available.

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Nextbio logo
data from next-gen sequencing and microarray technologies

NextBio Enterprise is a web-based solution that enables users to systematically integrate and interpret public and proprietary molecular data and clinical information from individual patients, population studies and model organisms, thus applying genomic data in novel and useful ways, both in research and in the clinic.

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GeneProf logo

GeneProf is a web-based, graphical software suite that allows users either to quickly access public information on genes or to analyze data produced using next-generation sequencing platforms. GeneProf simplifies the construction of complex workflows by providing assistive web forms (‘wizards’) that conceal the underlying complexities of workflow programming.

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ENA logo
a public archive and repository where nucleotide sequences generated by next-generation sequencing methodologies can be submitted
Subcategories: EMBL

ENA (European Nucleotide Archive) operates as a public archive and repository where nucleotide sequences generated by next-generation sequencing methodologies can be submitted. Data can be searched interactively and programmatically using free text and sequence similiary search based queries. It is a useful utility also for patent data search.ENA

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Biocarta Gene Search logo
conduct broad molecular or genetic investigation

Conduct any broad molecular or genetic investigation, by organism, area of research, or keyword search, using multiple online databases.

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BioGPS logo

A free extensible and customizable gene annotation portal, a complete resource for learning about gene and protein function.

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EBI logo
EMBL European Bioinformatic Istitute
Subcategories: EMBL

EBI (EMBL European Bioinformatic Istitute) home page provides a central access point to search several databases for information on genes, proteins, enzymes etc.

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Genome Project logo
searchable collection of complete and incomplete large-scale sequencing, assembly, annotation, and mapping projects for cellular organisms
Subcategories: ncbi

The NCBI Entrez Genome Project database is intended to be a searchable collection of complete and incomplete (in-progress) large-scale sequencing, assembly, annotation, and mapping projects for cellular organisms. The database is organized into organism-specific overviews that function as portals from which all projects in the database pertaining to that organism can be browsed and retrieved (see Figure 1). For example, you will find all information regarding the human genome project on this pro

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