GENE INFORMATION SEARCH

Show as: Icons - List - Order by: Novelty - Popularity - Name

Add to my favorites

HomoloGene

Category: Gene information search

Subcategories: NCBI

HomoloGene (NCBI) is a system for automated detection of homologs among the annotated genes of several completely sequenced eukaryotic genomes.

...continue to read

Add to my favorites

EST

Category: Gene information search

Subcategories: NCBI

The EST database (NCBI) is a collection of short single-read transcript sequences from GenBank. These sequences provide a resource to evaluate gene expression, find potential variation, and annotate genes.

...continue to read

Add to my favorites

VEGA - HAVANA

Category: Gene information search

Subcategories: Sanger

The Vertebrate Genome Annotation (VEGA) genome browser is a central repository for high quality manual annotation of vertebrate finished genome sequence. The majority of the annotation is from the HAVANA group at the Welcome Trust Sanger Institute.

...continue to read

Add to my favorites

GEO

Gene Expression Omnibus

Category: Gene information search

Subcategories: NCBI

GEO is a public functional genomics data repository supporting MIAME-compliant data submissions. Array- and sequence-based data are accepted. Tools are provided to help users query and download experiments and curated gene expression profiles.

...continue to read

Add to my favorites

H-InvDB

Category: Gene information search

By extensive analyses of all human transcripts, H-InvDB (Integrated DB of Annotated Human Genes) provides curated annotations of human genes and transcripts that include gene structures, alternative splicing isoforms, non-coding functional RNAs, protein functions, functional domains, sub-cellular localizations, metabolic pathways, protein 3D structure, genetic polymorphisms (SNPs, indels and microsatellite repeats) , relation with diseases, gene expression profiling, and molecular evolutionary f

...continue to read

Add to my favorites

dbDNV

Gene duplications

Category: Gene information search

The DNV database (dbDNV) has been established to promote more accurate variation annotation. Aside from the flat file download, users can explore the gene-related duplications and the associated DNVs by DGL and DNV searches, respectively

...continue to read

Add to my favorites

Gene Enhancer Atlas

Category: Gene information search

The transcribed enhancer atlas holds ~40.000 enhancers that are detected by bidirectional capped transcription, using the FANTOM5 CAGE expression atlas encompassing 135 primary cell and 432 tissue samples from human (Andersson et al.Nature 507,455–461, 2014)

...continue to read

Add to my favorites

Expression Atlas

Category: Gene information search

Subcategories: EMBL

The Expression Atlas provides information on gene expression patterns under different biological conditions such as a gene knock out, a plant treated with a compound, or in a particular organism part or cell. It includes both microarray and RNA-seq data. The data is re-analysed in-house to detect interesting expression patterns under the conditions of the original experiment. There are two components to the Expression Atlas, the Baseline Atlas and the Differential Atlas. The Baseline Atlas displ

...continue to read

Add to my favorites

GTExPortal

The Genotype-Tissue Expression Consortium

Category: Gene information search

The GTEx Consortium adopts a strategy called expression quantitative trait loci (eQTL) mapping that allows the researchers to generate a comprehensive catalogue of associations between genetic variation and gene expression across many tissues in many individuals. The processed data are available in this website (see: Nat Genet. 2013 June ; 45(6): 580–585; Ward & Gilad Nature 550:190, 2017).

...continue to read

Page: 1 2