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ClustalW2 logo
ClustalW2
Category: DNA alignment, Sequencing and assembly software
Subcategories: EMBL

ClustalW2 is a general purpose multiple sequence alignment program for DNA or proteins. The online version is hosted by EMBL. It produces biologically meaningful multiple sequence alignments of divergent sequences. It calculates the best match for the selected sequences, and lines them up so that the identities, similarities and differences can be seen. Registration not required.

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GeneWise logo
GeneWise
Pairwise Sequence Alignment
Category: DNA sequencing
Subcategories: EMBL

The Wise2 form compares a protein sequence to a genomic DNA sequence, allowing for introns and frameshifting errors. Registration not required.

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EMBL PhD Program logo
EMBL PhD Program
Category: PhD programs and Masters
Subcategories: PhD program , EMBL

The EMBL International PhD Programme, originally established in 1983, represents the flagship of EMBL's commitment to first class training and education. Registration not required.

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STITCH logo
STITCH
Category: Protein informations, Protein interactions
Subcategories: EMBL

STITCH is a resource to explore known and predicted interactions of chemicals and proteins. Chemicals are linked to other chemicals and proteins by evidence derived from experiments, databases and the literature. Registration not required.

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ENA logo
ENA
a public archive and repository where nucleotide sequences generated by next-generation sequencing methodologies can be submitted
Category: Gene information search
Subcategories: EMBL

ENA (European Nucleotide Archive) operates as a public archive and repository where nucleotide sequences generated by next-generation sequencing methodologies can be submitted. Data can be searched interactively and programmatically using free text and sequence similiary search based queries. It is a useful utility also for patent data search.ENA Registration not required.

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EBI logo
EBI
EMBL European Bioinformatic Istitute
Category: Gene information search, Protein informations
Subcategories: EMBL

EBI (EMBL European Bioinformatic Istitute) home page provides a central access point to search several databases for information on genes, proteins, enzymes etc. Registration not required.

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ArrayExpress Archive logo
ArrayExpress Archive
Category: DNA microarray data analysis
Subcategories: EMBL

The ArrayExpress Archive (EMBL-EBI) is a database of functional genomics experiments including gene expression where you can query and download data collected to MIAME and MINSEQE standards. Registration not required.

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Genome-Wide Association (GWA) Studies logo
Genome-Wide Association (GWA) Studies
Category: Genetic variations
Subcategories: EMBL

The genome-wide association study (GWAS) publications listed in this catalog establish genetic associations between hundreds of genomic loci and complex (multigenic)traits, many of them diseases. Only those attempting to assay at least 100,000 single nucleotide polymorphisms (SNPs) in the initial stage, are included here. Registration not required.

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PDBsum: Protein 3D dabase logo
PDBsum: Protein 3D dabase
Category: Protein informations
Subcategories: EMBL

PDBsum provides an at-a-glance overview of every macromolecular structure deposited in the Protein Data Bank (PDB), giving schematic diagrams of the molecules in each structure and of the interactions between them.

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MEROPS logo
MEROPS
Peptidase Database
Category: Protein informations
Subcategories: EMBL

The MEROPS database is an information resource for peptidases (also termed proteases, proteinases and proteolytic enzymes) and the proteins that inhibit them. Registration not required.

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ChEMBL protein-ligand interaction logo
ChEMBL protein-ligand interaction
Category: Protein informations
Subcategories: EMBL

ChEMBL, an open-access database, contains more than 5 million interactions between proteins and ligands that have been published in peer-reviewed journals or reported by laboratories and screening centers . Under ChEMBL’s “Ligand Search” tab, you can enter a compound’s SMILES notation in the “List Search” box and click “Fetch Compounds.” On the next page, clicking on the ChEMBL compound identifier under the 2-D drawing takes you to the Compound Report Card page, which includes th... Registration not required.

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Expression Atlas logo
Expression Atlas
Category: Gene information search
Subcategories: EMBL

The Expression Atlas provides information on gene expression patterns under different biological conditions such as a gene knock out, a plant treated with a compound, or in a particular organism part or cell. It includes both microarray and RNA-seq data. The data is re-analysed in-house to detect interesting expression patterns under the conditions of the original experiment. There are two components to the Expression Atlas, the Baseline Atlas and the Differential Atlas. The Baseline Atlas displ... Registration not required.

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