NOVELTIES
QCancer is an algorithm, which can be used to calculate the absolute risk of a patient having an undiagnosed cancer based on a number of factors.The QCancer algorithm and the cancer risk score take into account patient symptoms, risk factors, such as age and sex, smoking status, family history, postcode and certain comorbidities. Registration not required.
Click here for more informationsPublished on 2019-10-12 04:56:56
The web site provide a web application to construct high-quality estimation graphics, that displays an experimental dataset’s complete statistical information. Plots can be saved in image formats suitable for publication (PNG and SVG).With the web application and open-source libraries, DABEST caters to both scripting and spreadsheet workflows, empowering all researchers to rapidly adopt better data-analysis practices (see Ho et al., Nature Methods 16:565,2019). Registration not required.
Click here for more informationsPublished on 2019-09-14 10:44:34
Free Statistics Calculators from Daniel Soper is a comprehensive, easy to navigate, well organized and well presented site to perform several statistical calculi Registration not required.
Click here for more informationsPublished on 2019-09-14 10:15:30
CancerMine resource is a literature-mined and routinely updated database of drivers, oncogenes and tumor suppressors in different types of cancer. This resource provides information on genes that are drivers (frequently harbor cancer-promoting mutations), oncogenes (cancer-promoting) and tumor suppressors (protective against cancer) in a large number of different cancers. Context is key as some genes (e.g. NOTCH1) are oncogenes in one cancer and tumor suppressive in another. All data has been text-mined from articles and the source sentence and links are provided. (Lever et al., Nature Meth 16:505, 2019). Registration not required.
Click here for more informationsPublished on 2019-06-09 11:04:42
This web site offers free resources for students and researchers working with statistics. All the calculators and tools featured here have been designed with ease of use and clarity of presentation in mind. The web site has three main sections: statistical calculators, which deals mainly with hypothesis testing; p-value calculators, which allow you to derive p-values from Z, t, chi-square and Pearson (r); and descriptive statistics - averages, variance, and easy histogram and bar chart makers. Registration not required.
Click here for more informationsPublished on 2018-11-30 03:52:43
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browse restriction enzymes by name, sequence, overhang, or type
Category: Biomedical products search
Enzyme Finder by New England Biolabs allows you to select restriction enzymes by name, sequence, overhang, or type. Sequences should be entered using single letter code nomenclature. In search results, enzymes supplied by NEB are listed first and displayed as links. Registration not required.
Click here for more informationsPublished on 2018-11-24 14:22:29
Gene ID Conversion Tool is a comprehensive and fast accession mapping system in DAVID 2.1. With it any given gene accession can be quickly mapped to another based on the user's choice. The tool also automatically suggests possible choices for the ambiguous gene accessions in the list. Registration not required.
Click here for more informationsPublished on 2018-11-24 14:09:23
The ProteomeTools project is a joint effort of the Technical University of Munich (TUM), JPT Peptide Technologies, SAP SE and Thermo Fisher Scientific. It is dedicated to translating the human proteome into molecular and digital tools for drug discovery, personalized medicine and life science research. Over the course of the project, ~1.4 million synthetic peptides covering essentially all human gene products including important post translational modifications will be synthesized and analyzed using multimodal LC-MS/MS. We welcome participation to the project by the scientific community by e.g. suggesting sets of peptides to synthesize, offering measurements using other types of LC-MS/MS or developing applications and data analysis tools. Registration not required.
Click here for more informationsPublished on 2018-06-24 04:13:24
A protein knowledge-base. It includes entries on more than 20,000 proteins and nearly 200,000 posttranslational modifications. Registration not required.
Click here for more informationsPublished on 2018-06-20 09:43:16
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Biobanking and BioMolecular Resources Research Infrastructure–European Research Infrastructure Consortium
Category: Biomedical products search
The BBMRI-ERIC Directory will help researches to spot relevant biobanks and get their contact information. It also list infrastructures to store samples for research. It has produced a database of European biorepositories that is based on the Minimum Information About Biobank Data Sharing (MIABIS) guidelines. Registration not required.
Click here for more informationsPublished on 2018-05-05 11:10:42
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find antibodies in publications
Category: Biomedical products search
BenchSci allows: to search for antibodies
BenchSci is an intelligence platform for the search for reagents that scientists can use in the design of materials and methods for a new research task. BenchSci searches for both the right antibody to use and specific recommendations for experiments, decoding millions of scientific articles.It uses automatic learning to identify and display in a fraction of the time the most relevant figures and methods for the posted survey. BenchSci automatic learning technology identifies the exact information scientists seek in each article. The ultimate goal is to reduce research hours and failed experiments, saving time and money. BenchSci is available free of charge for academic scientists. Registration not required.
Click here for more informationsPublished on 2018-02-25 07:09:59
DeepL is a freely available translation service based on neural machine learning capable of translating to and from seven major European languages. It provides a natural translation that comes closer to that of a trained translatoe and it does particularly well with technical text. Registration not required.
Click here for more informationsPublished on 2018-02-14 03:49:29
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match your article to Elsevier journals
Category: Biomedical journals
Elsevier Journal Finder allows: find journals for publishing your scientific article, to match your article to Elsevier journals
Elsevier Journal Finder helps you find journals that could be best suited for publishing your scientific article. It uses smart search technology and field-of-research specific vocabularies to match your article to Elsevier journals. Simply insert your title and abstract and select the appropriate field-of-research for the best results. Registration not required.
Click here for more informationsPublished on 2018-02-13 04:14:33
The calculator (from University college, London) helps in calculating the probability that a results associated to asignificant P value, after doing a single unbiased experiment, is a false positive. False positive risk (FPR) is defined here as the probability that a result which is significant at a specified P value, is a false positive result. Registration not required.
Click here for more informationsPublished on 2018-01-19 11:31:50
This website provides a variety of online calculators, such as math and physics, financial, statistics, engineering and conversion calculators Registration not required.
Click here for more informationsPublished on 2017-11-08 05:49:36
The platform SourceData, an initiative by EMBO, is based on annotation of the figures in papers in a way thatbis machine readable and therefore searchable. SourceData is an openly accessible and easily applicable data discovery tool allowing biomedical scientists to share figures and the underlying source data in a way that is machine-readable. SourceData provides a novel platform for researchers who wish to make their publications discoverable based on their data content, to find specific data, to test or generate new hypotheses, and to share and connect data. (See Nature Methods 14:1017, 2017; Liechti et al., Nat Meth 14:1021, 2017). Registration not required.
Click here for more informationsPublished on 2017-11-04 05:51:41
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Resource Identification Portal
Category: Biomedical products search, Biomedical journals
This is the Resource Identification Portal, supporting NIH's new guidelines for Rigor and Transparency in biomedical publications. Authors are instructed to authenticate key biological resources: Antibodies, Model Organisms, and Tools (software, databases, services), by finding or generating stable unique identifier named Research Resource Identifiers or RRIDs (Bandrowski et al., F1000Research 4:134, 2015). See also The Resource Identification Initiative Force 11 at: https://www.force11.org/group/resource-identification-initiative/. Registration not required.
Click here for more informationsPublished on 2017-10-11 08:57:03
bioRxiv (pronounced io-archive) is a free online archive and distribution service for unpublished preprints in the life sciences. It is operated by Cold Spring Harbor Laboratory, a not-for-profit research and educational institution. By posting preprints on bioRxiv, authors are able to make their findings immediately available to the scientific community and receive feedback on draft manuscripts before they are submitted to journals. Registration required.
Click here for more informationsPublished on 2017-10-07 10:02:58
How Can I Share It is a sharing resource for the scientific community to guide researchers on how to share articles quickly and easily while following copyright rules. Registration not required.
Click here for more informationsPublished on 2017-09-14 03:28:47
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Chemical Probes Objective Assessment Resource
Category: Chemicals search, Biomedical products search
The Probe Miner: Objective Assessment of Chemical Probes is a community resource for the evaluation of chemical probes based on large-scale, publicly available, medicinal chemistry data. It is intended to empower researchers to select the best probes based on objective, data driven criteria. This resource provides evaluation of > 1.8m small molecules against for >2,200 human targets and is regularly updated in response to updates in the publicly available medicinal chemistry data. Our continuing data curation efforts will ensure that this resource is continually evolving and improving. Registration not required.
Click here for more informationsPublished on 2017-09-04 10:37:07
Biomedical search tools
Online genomic tools
Online proteomics tools
Calculators
Biomedical lab tools
Scientific writing/reading
Biomedical communities
Biomedical funding and jobs
Medical topics
Biomedical softwares